Talk:Gluten immunochemistry/Motifs

Below is an account of sequence motifs that are repeated in more than on gliadin isoform or more than one species. Assume that new entries of the motifs are available in the core nucleotide database.

Alpha gliadin "α-20" motifs

^[1] (mat. 76-86)¹, (88-98, mat +13)², (89-99, mat +13)³, (95-105, mat +20)⁴, (96-106, mat +20)⁵, (101-111, mat. +20)⁶

² _AAY45930 Aegilops speltoides (wild spelt, PMID 16403227)
⁴ _ABD62749 Triticum monococcum (Einkorn, ABD62749), T. aruatu
¹ _BAA12318, ... Triticum aestivum (common wheat, PMID 9738916)
³ _AAY45923, ... Triticum monococcum (Einkorn, PMID 16403227)
⁵ _AAA96525, ... Triticum aestivum (common wheat)
⁵ _CAA10257 Triticum aestivum spelta arduini (spelt)
⁵ _ABD62750 Triticum monococcum aegilopoides (wild einkorn)
⁵ _ABB92633, ... Triticum turgidum durum (durum wheat)
⁵ _ABB92633 Triticum turgidum monococcoides (wild emmers wheat)
⁵ _AAY45941, ... Aegilops Tauschii (Tausch's goatgrass, PMID 16403227)
⁶ _AAA34290 Triticum aestivum (PMID 3038689)Pdeitiker 03:11, 30 June 2007 (UTC)[reply]

Gamma gliadin "γ-30" motif

_AAK84773- (207-215) Triticum aestivum cheyenne (bread wheat)
_AAK84777- (236-244) Triticum aestivum cheyenne (bread wheat)
_AF120267- (246-254) Triticum aestivum spelta Oberkulmer
_AAK84778 -(249-257) Triticum aestivum cheyenne (bread wheat)
_AAK84777 -(253-261) Triticum aestivum cheyenne
_AAF42989 - (259-267) Triticum aestivum Yamhill
_AAK84774-(278-286) Triticum aestivum cheyenne
_AAK84779- (288-296) Triticum aestivum cheyenne (bread wheat)
many more in the Aegilops, Triticum, Thinopyrum genera.Pdeitiker 03:29, 30 June 2007 (UTC)[reply]

References

^ Vader W, Kooy Y, Van Veelen P, De Ru A, Harris D, Benckhuijsen W, Pena S, Mearin L, Drijfhout JW, and Koning F. (2002). "The gluten response in children with celiac disease is directed toward multiple gliadin and glutenin peptides". Gastroenterology. 122 (7): 1729–1737. PMID 12055577.{{cite journal}}: CS1 maint: multiple names: authors list (link)

[Vader_2002-1] Vader W, Kooy Y, Van Veelen P, De Ru A, Harris D, Benckhuijsen W, Pena S, Mearin L, Drijfhout JW, and Koning F. (2002). "The gluten response in children with celiac disease is directed toward multiple gliadin and glutenin peptides". Gastroenterology. 122 (7): 1729–1737. PMID 12055577.{{cite journal}}: CS1 maint: multiple names: authors list (link)

[1]